* Refactor PKI factory and add type checking

This allows for more DRY addition of new PKI types, and stricter
type checking. This also allows for simpler enumeration of
supported PKI formats which will be used in further updates to
simplify the CLI codebase.

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* revamp CLI flags; support different versions for upload

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* Add Alpine Package type

This adds support for the alpine package format used by Alpine Linux,
which is the concatenation of three tgz files (signature, control data,
and then the actual package files).

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* use shaFlag for --artifact-hash

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* change arg type to PKIFormat

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* defer type-specific validation logic to type code (instead of in CLI); also use CliLogger throughout CLI

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* refactor factory code

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* review comments

Signed-off-by: Bob Callaway <bob.callaway@gmail.com>

* update boilerplate header and apply go fmt

Signed-off-by: Carlos Panato <ctadeu@gmail.com>

* lints: fix golangci-lint issues

Signed-off-by: Carlos Panato <ctadeu@gmail.com>

* updated based on feedback

Signed-off-by: Carlos Panato <ctadeu@gmail.com>

The special keys "message" and "severity" are used to filter by default in the UI.

We also need to use this somehow in the log_proof command...

This is only toggled on for the server right now.

Some changes:
- import names (app -> api, logging -> log)
- Commands package (cmd -> app)

This also breaks the go module dependency on rekor-server.